EpiReport & EpiSignalDetection

Project description

The EpiSignalDetection R package is a tool for detection of epidemiological signals.
The EpiReport R package is a tool that allows the user to draft an epidemiological report similar to the ECDC Annual Epidemiological Report in Microsoft Word format for a given disease.

Context situation

Both R packages are publically available on the Comprehensive R Archive Network (CRAN) or ECDC GitHub public repositories:

EpiSignalDetection

- https://CRAN.R-project.org/package=EpiSignalDetection
- https://github.com/EU-ECDC/EpiSignalDetection

EpiReport

- https://CRAN.R-project.org/package=EpiReport
- https://github.com/EU-ECDC/EpiReport

Project activities

Plans of analysis

The team developed plans of analysis for each project and analysis.

CRAN submission

The team realised all checks and adaptations necessary to CRAN submission. Maintenance is ensured to make sure both packages remain available on the CRAN.

R packages

Epiconcept developed the R scripts for both analysis and wrapped the code into standardised R packages.

Scientific publications

EpiReport: Epidemiological report, R package, [software application]

Stockholm: European Centre for Disease Prevention and Control; 2018

Version 0.1.0

Available here

EpiSignalDetection: Signal Detection Analysis, R package, [software application]

Stockholm: European Centre for Disease Prevention and Control; 2018

Version 0.1.1